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1

IDENTIFYING A THRESHOLD FOR THE EXECUTIVE FUNCTION ADVANTAGE IN BILINGUAL CHILDREN

De Cat, Cecile, Gusnanto, Arief, Serratrice, Ludovica

Journal:

Studies in Second Language Acquisition

Year:

2017

Language:

english

File:

PDF, 777 KB

english, 2017

2

A statistical method for analysing cospeciation in tritrophic ecology using electrical circuit theory

Nooney, Colleen, Barber, Stuart, Gusnanto, Arief, Gilks, Walter R.

Journal:

Statistical Applications in Genetics and Molecular Biology

Year:

2017

Language:

english

File:

PDF, 3.45 MB

english, 2017

3

Variable selection in random calibration of near-infrared instruments: ridge regression and partial least squares regression settings

Arief Gusnanto, Yudi Pawitan, Jian Huang, Bill Lane

Journal:

Journal of Chemometrics

Year:

2003

Language:

english

File:

PDF, 260 KB

english, 2003

4

Estimation of significance thresholds for genomewide association scans

Frank Dudbridge, Arief Gusnanto

Journal:

Genetic Epidemiology

Year:

2008

Language:

english

File:

PDF, 126 KB

english, 2008

5

Improving the power to detect differentially expressed genes in comparative microarray experiments by including information from self–self hybridizations

Arief Gusnanto, Brian Tom, Philippa Burns, Iain Macaulay, Daphne C. Thijssen-Timmer, Marloes R. Tijssen, Cordelia Langford, Nicholas Watkins, Willem Ouwehand, Carlo Berzuini, Frank Dudbridge

Journal:

Computational Biology and Chemistry

Year:

2007

Language:

english

File:

PDF, 328 KB

english, 2007

6

Identification of candidate genes linking systemic inflammation to atherosclerosis; results of a humanin vivoLPS infusion study

Suthesh Sivapalaratnam, Rosienne Farrugia, Max Nieuwdorp, Cordelia F Langford, Rachel T van Beem, Stephanie Maiwald, Jaap Jan Zwaginga, Arief Gusnanto, Nicholas A Watkins, Mieke D Trip, Willem H Ouweh

Journal:

BMC Medical Genomics

Year:

2011

Language:

english

File:

PDF, 237 KB

english, 2011

7

A DNA microarray for fission yeast: minimal changes in global gene expression after temperature shift

Yongtao Xue, Stefan A. Haas, Laurent Brino, Arief Gusnanto, Mark Reimers, Driss Talibi, Martin Vingron, Karl Ekwall, Anthony P. H. Wright

Journal:

Year:

2004

Language:

english

File:

PDF, 382 KB

english, 2004

8

YS03 Gene Expression Profiling of Platelet RNA Identifies Differentially Expressed Genes Associated with Collagen Signalling Responses

P. Carr, A. Gusnanto, I. C. Macaulay, F. Dudbridge, C. Langford, W. H. Ouwehand, N. A. Watkins

Journal:

Transfusion Medicine

Year:

2006

Language:

english

File:

PDF, 468 KB

english, 2006

9

P50 Novel Activatory and Inhibitory Platelet Receptors Identified Through Comparative Gene Expression Profiling of Megakaryocytes and Erythroblasts

I. C. Macaulay, M. R. Tijssen, D. Thijssen-Timmer, A. Gusnanto, P. Carr, M. Steward, C. Langford, P. Ellis, F. Dudbridge, J. Zwaginga, N. A. Watkins, E. Van Der Schoot, W. H. Ouwehand

Journal:

Transfusion Medicine

Year:

2006

Language:

english

File:

PDF, 460 KB

english, 2006

10

Estimating the number of true discoveries in genome-wide association studies

Woojoo Lee, A. Gusnanto, A. Salim, P. Magnusson, Xueling Sim, E.S. Tai, Y. Pawitan

Journal:

Statistics in Medicine

Year:

2012

Language:

english

File:

PDF, 1.81 MB

english, 2012

11

Partial least squares and logistic regression random-effects estimates for gene selection in supervised classification of gene expression data

Gusnanto, Arief, Ploner, Alexander, Shuweihdi, Farag, Pawitan, Yudi

Journal:

Journal of Biomedical Informatics

Year:

2013

Language:

english

File:

PDF, 694 KB

english, 2013

12

DNA ADDUCTS OF BENZO[ A ]PYRENE- AND DIBENZO[ A,L ]PYRENE-DIOL EPOXIDES IN HUMAN LUNG EPITHELIAL CELLS: KINETICS OF ADDUCT REMOVAL, EFFECTS ON CELL CYCLE CHECKPOINTS, AND GENE EXPRESSION

Dreij, Kristian, Bajak, Edyta, Sundberg, Kathrin, Cotgreave, Ian, Jernström, Bengt, Seidel, Albrecht, Gusnanto, Arief

Journal:

Polycyclic Aromatic Compounds

Year:

2004

Language:

english

File:

PDF, 732 KB

english, 2004

13

Identification of variation in the platelet transcriptome associated with Glycoprotein 6 haplotype

Burns, Philippa, Gusnanto, Arief, Macaulay, Iain C., Rankin, Angela, Tom, Brian, Langford, Cordelia F., Dudbridge, Frank, Ouwehand, Willem H., Watkins, Nicholas A.

Journal:

Year:

2008

Language:

english

File:

PDF, 348 KB

english, 2008

14

Transcription profiling in human platelets reveals LRRFIP1 as a novel protein regulating platelet function

Goodall, A. H., Burns, P., Salles, I., Macaulay, I. C., Jones, C. I., Ardissino, D., de Bono, B., Bray, S. L., Deckmyn, H., Dudbridge, F., Fitzgerald, D. J., Garner, S. F., Gusnanto, A., Koch, K., Lan

Journal:

Year:

2010

Language:

english

File:

PDF, 1.24 MB

english, 2010

15

Sparse alternatives to ridge regression: a random effects approach

Gusnanto, Arief, Pawitan, Yudi

Journal:

Journal of Applied Statistics

Year:

2015

Language:

english

File:

PDF, 489 KB

english, 2015

16

Estimating optimal window size for analysis of low-coverage next-generation sequence data

Gusnanto, A., Taylor, C. C., Nafisah, I., Wood, H. M., Rabbitts, P., Berri, S.

Journal:

Year:

2014

Language:

english

File:

PDF, 1.02 MB

english, 2014

17

False discovery rate, sensitivity and sample size for microarray studies

Pawitan, Y., Michiels, S., Koscielny, S., Gusnanto, A., Ploner, A.

Journal:

Year:

2005

Language:

english

File:

PDF, 184 KB

english, 2005

18

A PCR-based expression signature of malignancy in follicular thyroid tumors

Foukakis, T., Gusnanto, A., Au, A. Y., Hoog, A., Lui, W.-O., Larsson, C., Wallin, G., Zedenius, J.

Journal:

Endocrine Related Cancer

Year:

2007

Language:

english

File:

PDF, 435 KB

english, 2007

19

Stratifying tumour subtypes based on copy number alteration profiles using next-generation sequence data

Gusnanto, A., Tcherveniakov, P., Shuweihdi, F., Samman, M., Rabbitts, P., Wood, H. M.

Journal:

Year:

2015

Language:

english

File:

PDF, 3.26 MB

english, 2015

20

Fold-Change Estimation of Differentially Expressed Genes using Mixture Mixed-Model

Gusnanto, Arief, Ploner, Alexander, Pawitan, Yudi

Journal:

Statistical Applications in Genetics and Molecular Biology

Year:

2005

Language:

english

File:

PDF, 3.55 MB

english, 2005

21

Multidimensional local false discovery rate for microarray studies

Ploner, A., Calza, S., Gusnanto, A., Pawitan, Y.

Journal:

Year:

2006

Language:

english

File:

PDF, 998 KB

english, 2006

22

Correcting for cancer genome size and tumour cell content enables better estimation of copy number alterations from next-generation sequence data

Gusnanto, A., Wood, H. M., Pawitan, Y., Rabbitts, P., Berri, S.

Journal:

Year:

2012

Language:

english

File:

PDF, 628 KB

english, 2012

23

Robust smooth segmentation approach for array CGH data analysis

Huang, J., Gusnanto, A., O'Sullivan, K., Staaf, J., Borg, A., Pawitan, Y.

Journal:

Year:

2007

Language:

english

File:

PDF, 1.42 MB

english, 2007

24

Identification of differentially expressed genes and false discovery rate in microarray studies

Gusnanto, Arief, Calza, Stefano, Pawitan, Yudi

Journal:

Current Opinion in Lipidology

Year:

2007

Language:

english

File:

PDF, 185 KB

english, 2007

25

Identification of transcript regulatory patterns in cell differentiation

Gusnanto, Arief, Gosling, John Paul, Pope, Christopher

Journal:

Year:

2017

Language:

english

File:

PDF, 1.28 MB

english, 2017

26

Detecting multiple associations in genome-wide studies

Frank Dudbridge,Arief Gusnanto,Bobby PC Koeleman

Journal:

Year:

2006

Language:

english

File:

PDF, 271 KB

english, 2006

27

Discussion on the paper ‘Statistical contributions to bioinformatics: Design, modelling, structure learning and integration’ by Jeffrey S. Morris and Veerabhadran Baladandayuthapani

Houwing-Duistermaat, Jeanine J, Uh, Hae Won, Gusnanto, Arief

Journal:

Statistical Modelling

Year:

2017

Language:

english

File:

PDF, 89 KB

english, 2017

28

A method for automatic selection of parameters in NTCP modelling

Christophides, Damianos, Appelt, Ane L., Gusnanto, Arief, Lilley, John, Sebag-Montefiore, David

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2018

Language:

english

File:

PDF, 1.30 MB

english, 2018

29

Geometry-based distance for clustering amino acids

Abushilah, Samira F., Taylor, Charles C., Gusnanto, Arief

Journal:

Journal of Applied Statistics

Year:

2019

File:

PDF, 3.67 MB

2019

30

Prediction of tumour pathological subtype from genomic profile using sparse logistic regression with random effects

Kaymaz, Ãzlem, Alqahtani, Khaled, Wood, Henry M., Gusnanto, Arief

Journal:

Journal of Applied Statistics

Year:

2020

File:

PDF, 2.75 MB

2020

31

Properties and approximate p -value calculation of the Cramer test

Telford, Alison, Taylor, Charles C., Wood, Henry M., Gusnanto, Arief

Journal:

Journal of Statistical Computation and Simulation

Year:

2020

File:

PDF, 2.44 MB

2020